cellxgene-census

Q: How to install cellxgene-census?

Open your MCP config: ~/.claude.json. Then add the config to "mcpServers": { "cellxgene-census": { "command": "...", "args": [] } }. Finally, /mcp in Claude Code.

Q: What is cellxgene-census best for?

cellxgene-census is categorized under General. It covers: research, data-&-analytics.

New

19.9kSmitheryGeneralby davila7

Query CZ CELLxGENE Census (61M+ cells). Filter by cell type/tissue/disease, retrieve expression data, integrate with scanpy/PyTorch, for population-scale single-cell analysis.

First seen 5/23/2026

Install & Usage

Open your MCP config

~/.claude.json

Add the server config

Add the configuration to "mcpServers": { "cellxgene-census": { "command": "...", "args": [] } }

Restart Claude Code

/mcp

View source on GitHub

researchdata-&-analytics

Security Audits

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Frequently Asked Questions

What is cellxgene-census?

Query CZ CELLxGENE Census (61M+ cells). Filter by cell type/tissue/disease, retrieve expression data, integrate with scanpy/PyTorch, for population-scale single-cell analysis.

How to install cellxgene-census?

To install cellxgene-census: open your mcp config (~/.claude.json), then add the config to "mcpServers": { "cellxgene-census": { "command": "...", "args": [] } }. Finally, /mcp in Claude Code.

What is cellxgene-census best for?

cellxgene-census is a mcp categorized under General. It is designed for: research, data-&-analytics. Created by davila7.