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ibl-ai-agent

New
GitHub TrendingGeneralby int-brain-lab

IBL AI Agent helps you use a coding agent such as OpenAI Codex to analyze International Brain Laboratory (IBL) data.

First seen 5/22/2026

Summary

The IBL AI Agent skill enables Claude Code to act as a coding agent for analyzing International Brain Laboratory (IBL) data.

  • It streamlines data querying, processing, and visualization tasks, making it easier for researchers to extract insights from IBL datasets without manual coding.

Install & Usage

1
Create the agents directory
mkdir -p .claude/agents
2
Save the agent file

Add the configuration to .claude/agents/ibl-ai-agent.md

3
Invoke with @agent-name
@ibl-ai-agent

Use Cases

Query IBL brain-wide neural recordings to find specific neuron types or brain regions.
Automate preprocessing of IBL electrophysiology data for spike sorting and alignment.
Generate publication-ready plots of neural activity across trials or sessions.
Integrate IBL data with machine learning models for behavior prediction.
Batch-process multiple IBL sessions to compute summary statistics of neural responses.
Validate experimental metadata consistency across IBL datasets.

Usage Examples

1

/ibl-ai-agent Load the IBL dataset for session 'ibl_2023_01' and plot the average firing rate of neurons in the visual cortex.

2

/ibl-ai-agent Query all neurons with significant p-value < 0.01 in the hippocampus during the delay period.

3

Use IBL AI Agent to compute the correlation between pupil diameter and neural activity across all sessions in the dataset.

View source on GitHub
agent

Security Audits

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Frequently Asked Questions

What is ibl-ai-agent?

The IBL AI Agent skill enables Claude Code to act as a coding agent for analyzing International Brain Laboratory (IBL) data. It streamlines data querying, processing, and visualization tasks, making it easier for researchers to extract insights from IBL datasets without manual coding.

How to install ibl-ai-agent?

To install ibl-ai-agent: create the agents directory (mkdir -p .claude/agents), then add the config to .claude/agents/ibl-ai-agent.md. Finally, @ibl-ai-agent in Claude Code.

What is ibl-ai-agent best for?

ibl-ai-agent is a agent categorized under General. It is designed for: agent. Created by int-brain-lab.

What can I use ibl-ai-agent for?

ibl-ai-agent is useful for: Query IBL brain-wide neural recordings to find specific neuron types or brain regions.; Automate preprocessing of IBL electrophysiology data for spike sorting and alignment.; Generate publication-ready plots of neural activity across trials or sessions.; Integrate IBL data with machine learning models for behavior prediction.; Batch-process multiple IBL sessions to compute summary statistics of neural responses.; Validate experimental metadata consistency across IBL datasets..