general-skills
NewCustom general skills for improved reasoning, data extraction, and accounting
Overview
Custom Claude skills for enhanced reasoning, bioinformatics, accounting, and natural history museum workflows. Each skill is a self-contained module bundled into installable plugins.
Available Plugins and Skills
general-skills
| Skill | Description |
|---|---|
| extract-from-pdfs | 8-step pipeline for extracting structured data from scientific PDFs using Claude's vision. Supports abstract filtering (Ollama/Haiku/Sonnet), external validation (GBIF, WFO, GeoNames, PubChem, NCBI), and export to multiple formats. Docs → |
| document-ocr | Converts scanned PDFs and document images into clean Markdown using docling for layout (figures, tables, reading order) plus a vision-language OCR model. Preserves multi-column order, diacritics, and figures. Supports local vLLM/Ollama and cloud vision APIs (OpenAI, Anthropic). Docs → |
| accounting | Processes procurement card receipts, tracks expenses in Google Sheets, reconciles records, and generates entertainment supplement tables. Docs → |
| lab-ordering | Places lab supply orders from member requests. Routes by request header to Amazon Business, the Pritzker Lab Google Form, or a direct vendor; stages the cart/form and stops for human review before any purchase. Docs → |
bioinfo-skills
| Skill | Description |
|---|---|
| phylo-from-buscos | Generates phylogenomic workflows from genome assemblies using BUSCO/compleasm single-copy orthologs. Supports NCBI accessions, multiple schedulers (SLURM, PBS, local), concatenated and coalescent phylogenies. Docs → |
| biogeobears | Sets up BioGeoBEARS biogeographic analyses in R. Validates inputs, generates RMarkdown scripts, compares DEC/DIVALIKE/BAYAREALIKE models, and produces publication-ready ancestral range visualizations. Docs → |
museum-skills
| Skill | Description |
|---|---|
| emu-bulk-upload | Helps FMNH entomology curators bulk upload specimen data to the Emu database. Matches localities to existing records, creates new site records, and generates formatted upload tables. Docs → |
Installation
Claude Code — CLI, VS Code, or JetBrains (Recommended)
These instructions work the same way in:
- •Claude Code CLI — type commands directly in the terminal
- •VS Code — type commands in the Claude Code chat panel (or use
/pluginsto open the visual manager) - •JetBrains IDEs — type commands in the Claude Code panel
You only need to do this once:
/plugin marketplace add brunoasm/my_claude_skillsInstall all plugins:
/plugin install general-skills@brunoasm/my_claude_skills
/plugin install bioinfo-skills@brunoasm/my_claude_skills
/plugin install museum-skills@brunoasm/my_claude_skillsOr install only the ones you want — each plugin is independent.
git clone https://github.com/brunoasm/my_claude_skills.git
cd my_claude_skillsThen in Claude Code:
/plugin marketplace add .
/plugin install general-skills@.When installing, Claude Code will ask you to choose a scope:
- •User — available in all your projects
- •Project — shared with collaborators via
.claude/settings.json - •Local — only you, only this repo
Claude.ai (Web)
- Download the zip file for the desired skill from releases
- Go to Claude.ai Settings > Capabilities > Skills
- Click Upload Skill and select the ZIP file
- Enable the skill
Resources
Install & Usage
mkdir -p .claude/skillsmkdir -p .claude/skills && curl -o .claude/skills/general-skills.md https://raw.githubusercontent.com/brunoasm/my_claude_skills/main/SKILL.md/general-skillsFrequently Asked Questions
What is general-skills?
Custom general skills for improved reasoning, data extraction, and accounting
How to install general-skills?
To install general-skills, create the .claude/skills directory in your project, then run the curl command to download the skill file. Once installed, invoke it in Claude Code with /general-skills.
What is general-skills best for?
general-skills is a community categorized under Data & Analytics. Created by Bruno de Medeiros.